University of Cologne
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What’s happening in the lab.

Publications, funding, awards, conferences, collaborations, and research milestones. A rolling log of what the lab is up to, in reverse chronological order.

2026 · 04

Scalable differentiation of human cardiac organoids from iPSCs for cardiac cell therapy

Publication · Theranostics — Hamad, Aksoy, Kalil, Martínez-Falguera, Jüngst, Zahn, Gaedke, Peinkofer, Boukens, Firuzi, Prause, Aranyó, Bisbal, Iborra-Egea, Jorge, Iraola-Picornell, Teis, de Raffele, Delgado, Nitsche, Sachinidis, Khalil, Alhashimi, Schauss, Bayes-Genis, Gálvez-Montón, Pfannkuche

“Scalable differentiation of human cardiac organoids from iPSCs generates cardiac tissues for cardiac cell therapy.”

The team established a bioreactor-based protocol that scales up the production of human iPSC-derived cardiac organoids containing cardiomyocytes, fibroblasts, and endothelial cells. Transplanted into a porcine model of acute myocardial infarction, the organoids engrafted and improved cardiac function within 30 days without inducing dangerous arrhythmias — a key step toward regenerative cardiac therapy.

Published in: Theranostics, 2026; 16(12): 6437–6462. doi: 10.7150/thno.127654

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Publication
2026 · 04

Congratulations to Lisa Münchhalfen on her graduation

Milestone · PhD thesis successfully defended at the Marga and Walter Boll Laboratory
Lisa Münchhalfen at her PhD graduation

The whole MWB Lab joins in celebrating Lisa Münchhalfen on the successful completion of her PhD. Her thesis investigated the genetic network of the cardiac lineage and applied CRISPR-based modification of cell lines to overcome hurdles for pre-clinical transplantation experiments.

Heartfelt congratulations from the team — and best wishes for what comes next.

Milestone
2026 · 04

Prototype of a novel bioreactor — innovative bubble-free gassing

Collaboration · Single-use prototype bioreactors provided by Biothrust GmbH for the BiRonCa upscaling effort
Prototype single-use bioreactor with bubble-free gassing system

In frame of the collaborative project Bionic Reactors for Cardiac Organoids (BiRonCa), we are provided with prototype single-use bioreactors by our research partner Biothrust GmbH (Aachen, Germany). The team at MWB Lab explores upscaling of iPS cell culture and cardiac differentiation.

The innovative design facilitates the entry of oxygen and the removal of carbon dioxide by a system employing hollow fibers, analogous to those found in artificial lungs.

BioThrust: Bionic Bioreactors for scaled & efficient CGT & biologics processes →

Collaboration
2025 · 07

Functional analysis of human cardiac organoids

Collaboration · Multi-week contractile-force measurements with innoVitro GmbH in 96-well format

Functional analysis of contractile forces is a key indicator in research on cardiac organoids. Together with our research partner innoVitro GmbH, we are investigating the contractile forces of organoids over several weeks.

innoVitro possesses a technology that enables the highly accurate measurement of contractile forces in cardiac muscle cells and organoids in a 96-well format. Together, we are conducting research on new platform technologies for pharmaceutical applications.

Home — innoVitro GmbH →

Collaboration
2025 · 06

Cell-Based Therapies: Ferromagnetic Versus Superparamagnetic Cell Targeting

Publication · Bioengineering (MDPI) — Halhouli, Münchhalfen, Hamad, Schmitz-Ullrich, Nitsche, Gaedke, Schauss, Zhang, Pham, Bao, Pfannkuche

Authors: Tasneem Halhouli, Lisa Münchhalfen, Sarkawt Hamad, Larissa Schmitz-Ullrich, Frank Nitsche, Felix Gaedke, Astrid Schauss, Linlin Zhang, Quoc-Khanh Pham, Gang Bao, Kurt Paul Pfannkuche.

Published in: Bioengineering 2025, Volume 12, Issue 6, 657.

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Publication
2025 · 06

Scalable production of cardiac organoids — critical milestone achieved

Research milestone · Dr. Sarkawt Hamad and Ebru Aksoy scale up cardiac organoid differentiation for cell replacement therapy
Scaling up cardiac organoid production in the lab

For the first time, Dr. Sarkawt Hamad and Ebru Aksoy have succeeded in scaling up cardiac organoid differentiation for cell replacement therapy.

This milestone unlocks the production of therapeutically relevant quantities of cardiac organoids for preclinical transplantation trials — a key step on the translational path from bench to clinic.

Milestone
2025 · 05

BiRonCa bioreactor project funded by ZukunftBio.NRW

Funding · ~€850,000 over two years for bubble-free bioreactor scale-up with Biothrust GmbH

The working group led by Prof. Dr. Kurt Pfannkuche at the Marga and Walter Boll Laboratory for Cardiac Tissue Engineering is researching the use of cardiac organoids derived from human induced pluripotent stem cells for the treatment of cardiac infarction.

To produce therapeutically relevant quantities of organoids for preclinical transplantation trials, bioreactor processes are being optimised and scaled up from a small 200 mL laboratory system to larger reactors with a volume of 2–3 litres.

In a joint project with Biothrust GmbH (Aachen), an innovative gas transfer system is being tested that allows the reactors to be operated with higher cell densities. The Biothrust system is based on hollow fibres through which oxygen flows and is released into the cell culture medium without forming bubbles, while excess carbon dioxide is removed.

The state of North Rhine-Westphalia is funding the Bionic Reactors for Cardiac Organoids (BiRonCa) project for two years with around €850,000.

Learn more at ZukunftBio.NRW →

Funding
2025 · 03

Ebru Aksoy wins Best Poster Award at 3rd Dubai Stem Cell Congress

Award · 3rd Dubai Stem Cell Congress
Ebru Aksoy receiving the Best Poster Award at the 3rd Dubai Stem Cell Congress

Congratulations to Ebru Aksoy for winning the Best Poster Award (Student Category) at the 3rd Dubai Stem Cell Congress.

Her poster presented scalable manufacturing of human iPSC-derived cardiac organoids for preclinical therapy.

About the Dubai Stem Cell Congress →

Award
2025 · 02

Engineered in vitro multi-cell type ventricle model published

Publication · Adv. Healthcare Materials — Kuckelkorn, Aksoy, Stojanovic, Oulahyane, Ritter, Pfannkuche, Fischer

“Engineered In Vitro Multi-Cell Type Ventricle Model Generates Long-Term Pulsatile Flow and Modulates Cardiac Output in Response to Cardioactive Drugs.”

Authors: Christoph Kuckelkorn, Ebru Aksoy, Natalija Stojanovic, Laila Oulahyane, Mira Ritter, Kurt Pfannkuche, Horst Fischer.

Published in: Advanced Healthcare Materials, 2025 Feb 13: e2403897. doi: 10.1002/adhm.202403897

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Publication
2023 · 06

Official opening of the Marga and Walter Boll Laboratory

Milestone · Inauguration event at the Medical Faculty, University of Cologne

The Marga and Walter Boll Laboratory for Cardiac Tissue Engineering was officially opened on Thursday, 22 June 2023, in the large lecture hall of the physiology department of the Medical Faculty, University of Cologne.

Invited scientists presented current projects alongside talks from international experts:

  • 11:00 — Priv.-Doz. Dr. Kurt Pfannkuche (Cologne): “Research at the Laboratory for Cardiac Tissue Engineering”
  • 11:40 — Dr. Sarkawt Hamad (Cologne): “Human Cardiac Organoids for Cell Replacement Therapy”
  • 13:00 — Prof. Dr. Konrad Brockmeier (Cologne): “Challenges in congenital heart disease”
  • 13:30 — Prof. Dr. Bastiaan Boukens (Maastricht): “Arrhythmias in structural heart disease”
  • 14:15 — Prof. Dr. Horst Fischer (RWTH Aachen): “The Potential of Acoustics for 3D Tissue Engineering”
  • 14:45 — Dr. Nadine Nottrodt (Fraunhofer ILT): “Laser induced forward transfer for cell printing”
  • 15:00 — Katharina Schwab (Cologne): “Macroporous cryogel beads for cell culture”
  • 15:15 — Philipp Jahn (Cologne): “Cardiac microtissues by microfluidics”
  • 15:30 — Lisa Münchhalfen (Cologne): “Intraembryonic organ complementation assay”
Milestone
2023 · 06

Hortman Stem Cell Laboratory collaboration launched

Collaboration · Dr. Fatma Alhashimi joins the MWB Lab opening as guest of honour
Dr. Fatma Alhashimi at the Marga and Walter Boll Laboratory opening

On the occasion of the official opening of the Marga and Walter Boll Laboratory, we were honoured to welcome Dr. Fatma Alhashimi, director of the Hortman Stem Cell Laboratories in Dubai, as our guest.

Hortman Laboratories operates the first GMP laboratory for stem cells in the United Arab Emirates. We are looking forward to the cooperation.

Collaboration
2022 · 12

PERIDIAN project receives ZukunftBIO.NRW funding recommendation

Funding · Joint project with innoVitro GmbH and Fraunhofer Institute for Laser Technology

North Rhine-Westphalia has announced the positively evaluated projects in the Zukunftsmedizin call.

We are happy to find our PERIDIAN project on the list of successful applications. Together with our partners innoVitro GmbH and the Fraunhofer Institute for Laser Technology, we look forward to an exciting project.

All ZukunftBio.NRW projects →

Funding
2022 · 06

High-efficient serum-free differentiation of endothelial cells from hiPSCs

Publication · Stem Cell Research & Therapy 13(1):251 — Hamad, Derichsweiler, Gaspar, Brockmeier, Hescheler, Sachinidis, Pfannkuche

“High-efficient serum-free differentiation of endothelial cells from human iPS cells.”

Authors: Sarkawt Hamad, Daniel Derichsweiler, John Antonydas Gaspar, Konrad Brockmeier, Jürgen Hescheler, Agapios Sachinidis, Kurt Paul Pfannkuche.

Published in: Stem Cell Research & Therapy, 2022 Jun 11; 13(1):251.

Introduction. Endothelial cells (ECs) form the inner lining of all blood vessels and play important roles in vascular tone regulation, hormone secretion, anticoagulation, and immune cell extravasation. Limitless EC sources are required for in vitro studies and tissue engineering.

Method. Human iPSCs are cultured under serum-free conditions and induced into mesodermal progenitor cells via Wnt signalling for 24 h, then further differentiated into ECs using a combination of VEGF, bFGF, 8-Bromoadenosine 3′,5′-cyclic monophosphate (8Bro), and melatonin for 48 h.

Result. The protocol generates hiPSC-derived ECs at 90.9 ± 1.5% efficiency in only six days, without animal-derived serum, and transfers cleanly from 2D monolayers into 3D scalable bioreactor suspension cultures.

Read the full article →

Publication
2022 · 05

Generation of cardiac microtissues by microfluidic cell encapsulation

Publication · Biofabrication — Jahn, Karger, Khalaf, Hamad, Peinkofer et al.

“Engineering of cardiac microtissues by microfluidic cell encapsulation in thermoshrinking non-crosslinked PNIPAAm gels.”

Authors: Philipp Jahn, Rebecca Katharina Karger, Shahab Soso Khalaf, Sarkawt Hamad, Gabriel Peinkofer, Raja Ghazanfar Ali Sahito, Stephanie Pieroth, Frank Nitsche, Junqi Lu, Daniel Derichsweiler, Konrad Brockmeier, Jürgen Hescheler, Annette Schmidt, Kurt Paul Pfannkuche.

Published in: Biofabrication, accepted manuscript.

Cardiomyocytes and MSCs are encapsulated in PNIPAAm droplets above the lower critical solute temperature (32 °C), trapping cells in a collapsing polymer network and increasing local cell density by an order of magnitude. Stable, rhythmically contracting microtissues form within 24 h and are released by washout below the LCST.

Download the accepted manuscript →

Publication